update_uniprot_API

webservice.py

@@ -19,7 +19,7 @@ import json
 
 __ebiUrl__ = 'http://www.ebi.ac.uk/Tools/'
 __ebiGOUrl__ = 'https://www.ebi.ac.uk/QuickGO/services/'
-__uniprotUrl__ = 'http://www.uniprot.org/'
+__uniprotUrl__ = 'http://rest.uniprot.org/'
 __ebiSearchUrl__ = 'http://www.ebi.ac.uk/ebisearch/'
 
 
@@ -58,11 +58,11 @@ def search(query, dbName='uniprot', format='list', limit=100, columns=""):
     if dbName.startswith('uniprot'):
         # Construct URL
         if limit == None:  # no limit to number of results returned
-            url = "{}{}/?format={}&query={}&columns={}".format(__uniprotUrl__, dbName, format,
+            url = "{}{}/search?&format={}&query={}&columns={}".format(__uniprotUrl__, dbName, format,
                                                                urllib.parse.quote(query),
                                                                columns)
         else:
-            url = "{}{}/?format={}&limit={}&query={}&columns={}".format(__uniprotUrl__, dbName, format, str(limit),
+            url = "{}{}/search?format={}&limit={}&query={}&columns={}".format(__uniprotUrl__, dbName, format, str(limit),
                                                                         urllib.parse.quote(query), columns)
 
         # Get the entries